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update: separate environment for examples & example notebook updated

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- skew
- pllld_count
This commit is contained in:
Wataru Otsubo 2024-12-11 21:09:53 +09:00
parent 1dcd46e7c6
commit 2aedfaf380
6 changed files with 1731 additions and 217 deletions
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210
Manifest.toml
View file

@ -2,7 +2,7 @@
julia_version = "1.11.2"
manifest_format = "2.0"
project_hash = "e82c3289a33671d299515a19486ddf833e4288d8"
project_hash = "e20af0781afd5866dc7398b8d852e9c8ee3e4f13"
[[deps.ANSIColoredPrinters]]
git-tree-sha1 = "574baf8110975760d391c710b6341da1afa48d8c"
@ -31,39 +31,18 @@ version = "2.2.0"
uuid = "2a0f44e3-6c83-55bd-87e4-b1978d98bd5f"
version = "1.11.0"
[[deps.BayesHistogram]]
git-tree-sha1 = "5d5dda960067751bc1534aba765f771325044501"
uuid = "000d9b38-65fe-4c81-bdb9-69f01f102479"
version = "1.0.7"
[[deps.CSV]]
deps = ["CodecZlib", "Dates", "FilePathsBase", "InlineStrings", "Mmap", "Parsers", "PooledArrays", "PrecompileTools", "SentinelArrays", "Tables", "Unicode", "WeakRefStrings", "WorkerUtilities"]
git-tree-sha1 = "deddd8725e5e1cc49ee205a1964256043720a6c3"
uuid = "336ed68f-0bac-5ca0-87d4-7b16caf5d00b"
version = "0.10.15"
[[deps.Calculus]]
deps = ["LinearAlgebra"]
git-tree-sha1 = "9cb23bbb1127eefb022b022481466c0f1127d430"
uuid = "49dc2e85-a5d0-5ad3-a950-438e2897f1b9"
version = "0.5.2"
[[deps.CodecZlib]]
deps = ["TranscodingStreams", "Zlib_jll"]
git-tree-sha1 = "bce6804e5e6044c6daab27bb533d1295e4a2e759"
uuid = "944b1d66-785c-5afd-91f1-9de20f533193"
version = "0.7.6"
[[deps.ColorTypes]]
deps = ["FixedPointNumbers", "Random"]
git-tree-sha1 = "c7acce7a7e1078a20a285211dd73cd3941a871d6"
uuid = "3da002f7-5984-5a60-b8a6-cbb66c0b333f"
version = "0.12.0"
weakdeps = ["StyledStrings"]
[deps.ColorTypes.extensions]
StyledStringsExt = "StyledStrings"
[[deps.Compat]]
deps = ["TOML", "UUIDs"]
git-tree-sha1 = "8ae8d32e09f0dcf42a36b90d4e17f5dd2e4c4215"
@ -79,17 +58,6 @@ deps = ["Artifacts", "Libdl"]
uuid = "e66e0078-7015-5450-92f7-15fbd957f2ae"
version = "1.1.1+0"
[[deps.ConstructionBase]]
git-tree-sha1 = "76219f1ed5771adbb096743bff43fb5fdd4c1157"
uuid = "187b0558-2788-49d3-abe0-74a17ed4e7c9"
version = "1.5.8"
weakdeps = ["IntervalSets", "LinearAlgebra", "StaticArrays"]
[deps.ConstructionBase.extensions]
ConstructionBaseIntervalSetsExt = "IntervalSets"
ConstructionBaseLinearAlgebraExt = "LinearAlgebra"
ConstructionBaseStaticArraysExt = "StaticArrays"
[[deps.Crayons]]
git-tree-sha1 = "249fe38abf76d48563e2f4556bebd215aa317e15"
uuid = "a8cc5b0e-0ffa-5ad4-8c14-923d3ee1735f"
@ -144,40 +112,12 @@ deps = ["ArgTools", "FileWatching", "LibCURL", "NetworkOptions"]
uuid = "f43a241f-c20a-4ad4-852c-f6b1247861c6"
version = "1.6.0"
[[deps.EarCut_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"]
git-tree-sha1 = "e3290f2d49e661fbd94046d7e3726ffcb2d41053"
uuid = "5ae413db-bbd1-5e63-b57d-d24a61df00f5"
version = "2.2.4+0"
[[deps.Expat_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl"]
git-tree-sha1 = "e51db81749b0777b2147fbe7b783ee79045b8e99"
uuid = "2e619515-83b5-522b-bb60-26c02a35a201"
version = "2.6.4+1"
[[deps.Extents]]
git-tree-sha1 = "81023caa0021a41712685887db1fc03db26f41f5"
uuid = "411431e0-e8b7-467b-b5e0-f676ba4f2910"
version = "0.1.4"
[[deps.FHist]]
deps = ["BayesHistogram", "LinearAlgebra", "MakieCore", "Measurements", "RecipesBase", "Requires", "Statistics", "StatsBase"]
git-tree-sha1 = "66013ca09dbaa9017a987562c19791c3e9a64a5a"
uuid = "68837c9b-b678-4cd5-9925-8a54edc8f695"
version = "0.11.7"
[deps.FHist.extensions]
FHistHDF5Ext = "HDF5"
FHistMakieExt = "Makie"
FHistPlotsExt = "Plots"
[deps.FHist.weakdeps]
CairoMakie = "13f3f980-e62b-5c42-98c6-ff1f3baf88f0"
HDF5 = "f67ccb44-e63f-5c2f-98bd-6dc0ccc4ba2f"
Makie = "ee78f7c6-11fb-53f2-987a-cfe4a2b5a57a"
Plots = "91a5bcdd-55d7-5caf-9e0b-520d859cae80"
[[deps.FilePathsBase]]
deps = ["Compat", "Dates"]
git-tree-sha1 = "7878ff7172a8e6beedd1dea14bd27c3c6340d361"
@ -193,34 +133,11 @@ weakdeps = ["Mmap", "Test"]
uuid = "7b1f6079-737a-58dc-b8bc-7a2ca5c1b5ee"
version = "1.11.0"
[[deps.FixedPointNumbers]]
deps = ["Statistics"]
git-tree-sha1 = "05882d6995ae5c12bb5f36dd2ed3f61c98cbb172"
uuid = "53c48c17-4a7d-5ca2-90c5-79b7896eea93"
version = "0.8.5"
[[deps.Future]]
deps = ["Random"]
uuid = "9fa8497b-333b-5362-9e8d-4d0656e87820"
version = "1.11.0"
[[deps.GeoFormatTypes]]
git-tree-sha1 = "59107c179a586f0fe667024c5eb7033e81333271"
uuid = "68eda718-8dee-11e9-39e7-89f7f65f511f"
version = "0.4.2"
[[deps.GeoInterface]]
deps = ["Extents", "GeoFormatTypes"]
git-tree-sha1 = "826b4fd69438d9ce4d2b19de6bc2f970f45f0f88"
uuid = "cf35fbd7-0cd7-5166-be24-54bfbe79505f"
version = "1.3.8"
[[deps.GeometryBasics]]
deps = ["EarCut_jll", "Extents", "GeoInterface", "IterTools", "LinearAlgebra", "StaticArrays", "StructArrays", "Tables"]
git-tree-sha1 = "b62f2b2d76cee0d61a2ef2b3118cd2a3215d3134"
uuid = "5c1252a2-5f33-56bf-86c9-59e7332b4326"
version = "0.4.11"
[[deps.Git]]
deps = ["Git_jll"]
git-tree-sha1 = "04eff47b1354d702c3a85e8ab23d539bb7d5957e"
@ -257,32 +174,11 @@ deps = ["Markdown"]
uuid = "b77e0a4c-d291-57a0-90e8-8db25a27a240"
version = "1.11.0"
[[deps.IntervalSets]]
git-tree-sha1 = "dba9ddf07f77f60450fe5d2e2beb9854d9a49bd0"
uuid = "8197267c-284f-5f27-9208-e0e47529a953"
version = "0.7.10"
weakdeps = ["Random", "RecipesBase", "Statistics"]
[deps.IntervalSets.extensions]
IntervalSetsRandomExt = "Random"
IntervalSetsRecipesBaseExt = "RecipesBase"
IntervalSetsStatisticsExt = "Statistics"
[[deps.InvertedIndices]]
git-tree-sha1 = "0dc7b50b8d436461be01300fd8cd45aa0274b038"
uuid = "41ab1584-1d38-5bbf-9106-f11c6c58b48f"
version = "1.3.0"
[[deps.IrrationalConstants]]
git-tree-sha1 = "630b497eafcc20001bba38a4651b327dcfc491d2"
uuid = "92d709cd-6900-40b7-9082-c6be49f344b6"
version = "0.2.2"
[[deps.IterTools]]
git-tree-sha1 = "42d5f897009e7ff2cf88db414a389e5ed1bdd023"
uuid = "c8e1da08-722c-5040-9ed9-7db0dc04731e"
version = "1.10.0"
[[deps.IteratorInterfaceExtensions]]
git-tree-sha1 = "a3f24677c21f5bbe9d2a714f95dcd58337fb2856"
uuid = "82899510-4779-5014-852e-03e436cf321d"
@ -350,32 +246,10 @@ deps = ["Libdl", "OpenBLAS_jll", "libblastrampoline_jll"]
uuid = "37e2e46d-f89d-539d-b4ee-838fcccc9c8e"
version = "1.11.0"
[[deps.LogExpFunctions]]
deps = ["DocStringExtensions", "IrrationalConstants", "LinearAlgebra"]
git-tree-sha1 = "a2d09619db4e765091ee5c6ffe8872849de0feea"
uuid = "2ab3a3ac-af41-5b50-aa03-7779005ae688"
version = "0.3.28"
[deps.LogExpFunctions.extensions]
LogExpFunctionsChainRulesCoreExt = "ChainRulesCore"
LogExpFunctionsChangesOfVariablesExt = "ChangesOfVariables"
LogExpFunctionsInverseFunctionsExt = "InverseFunctions"
[deps.LogExpFunctions.weakdeps]
ChainRulesCore = "d360d2e6-b24c-11e9-a2a3-2a2ae2dbcce4"
ChangesOfVariables = "9e997f8a-9a97-42d5-a9f1-ce6bfc15e2c0"
InverseFunctions = "3587e190-3f89-42d0-90ee-14403ec27112"
[[deps.Logging]]
uuid = "56ddb016-857b-54e1-b83d-db4d58db5568"
version = "1.11.0"
[[deps.MakieCore]]
deps = ["ColorTypes", "GeometryBasics", "IntervalSets", "Observables"]
git-tree-sha1 = "b774d0563bc332f64d136d50d0420a195d9bdcc6"
uuid = "20f20a25-4f0e-4fdf-b5d1-57303727442b"
version = "0.8.11"
[[deps.Markdown]]
deps = ["Base64"]
uuid = "d6f4376e-aef5-505a-96c1-9c027394607a"
@ -392,26 +266,6 @@ deps = ["Artifacts", "Libdl"]
uuid = "c8ffd9c3-330d-5841-b78e-0817d7145fa1"
version = "2.28.6+0"
[[deps.Measurements]]
deps = ["Calculus", "LinearAlgebra", "Printf", "Requires"]
git-tree-sha1 = "bdcde8ec04ca84aef5b124a17684bf3b302de00e"
uuid = "eff96d63-e80a-5855-80a2-b1b0885c5ab7"
version = "2.11.0"
[deps.Measurements.extensions]
MeasurementsBaseTypeExt = "BaseType"
MeasurementsJunoExt = "Juno"
MeasurementsRecipesBaseExt = "RecipesBase"
MeasurementsSpecialFunctionsExt = "SpecialFunctions"
MeasurementsUnitfulExt = "Unitful"
[deps.Measurements.weakdeps]
BaseType = "7fbed51b-1ef5-4d67-9085-a4a9b26f478c"
Juno = "e5e0dc1b-0480-54bc-9374-aad01c23163d"
RecipesBase = "3cdcf5f2-1ef4-517c-9805-6587b60abb01"
SpecialFunctions = "276daf66-3868-5448-9aa4-cd146d93841b"
Unitful = "1986cc42-f94f-5a68-af5c-568840ba703d"
[[deps.Missings]]
deps = ["DataAPI"]
git-tree-sha1 = "ec4f7fbeab05d7747bdf98eb74d130a2a2ed298d"
@ -430,11 +284,6 @@ version = "2023.12.12"
uuid = "ca575930-c2e3-43a9-ace4-1e988b2c1908"
version = "1.2.0"
[[deps.Observables]]
git-tree-sha1 = "7438a59546cf62428fc9d1bc94729146d37a7225"
uuid = "510215fc-4207-5dde-b226-833fc4488ee2"
version = "0.5.5"
[[deps.OpenBLAS_jll]]
deps = ["Artifacts", "CompilerSupportLibraries_jll", "Libdl"]
uuid = "4536629a-c528-5b80-bd46-f80d51c5b363"
@ -510,12 +359,6 @@ deps = ["SHA"]
uuid = "9a3f8284-a2c9-5f02-9a11-845980a1fd5c"
version = "1.11.0"
[[deps.RecipesBase]]
deps = ["PrecompileTools"]
git-tree-sha1 = "5c3d09cc4f31f5fc6af001c250bf1278733100ff"
uuid = "3cdcf5f2-1ef4-517c-9805-6587b60abb01"
version = "1.3.4"
[[deps.Reexport]]
git-tree-sha1 = "45e428421666073eab6f2da5c9d310d99bb12f9b"
uuid = "189a3867-3050-52da-a836-e630ba90ab69"
@ -527,12 +370,6 @@ git-tree-sha1 = "ffd19052caf598b8653b99404058fce14828be51"
uuid = "2792f1a3-b283-48e8-9a74-f99dce5104f3"
version = "0.1.0"
[[deps.Requires]]
deps = ["UUIDs"]
git-tree-sha1 = "838a3a4188e2ded87a4f9f184b4b0d78a1e91cb7"
uuid = "ae029012-a4dd-5104-9daa-d747884805df"
version = "1.3.0"
[[deps.SHA]]
uuid = "ea8e919c-243c-51af-8825-aaa63cd721ce"
version = "0.7.0"
@ -569,11 +406,6 @@ git-tree-sha1 = "66e0a8e672a0bdfca2c3f5937efb8538b9ddc085"
uuid = "a2af1166-a08f-5f64-846c-94a0d3cef48c"
version = "1.2.1"
[[deps.SparseArrays]]
deps = ["Libdl", "LinearAlgebra", "Random", "Serialization", "SuiteSparse_jll"]
uuid = "2f01184e-e22b-5df5-ae63-d93ebab69eaf"
version = "1.11.0"
[[deps.StaticArrays]]
deps = ["LinearAlgebra", "PrecompileTools", "Random", "StaticArraysCore"]
git-tree-sha1 = "777657803913ffc7e8cc20f0fd04b634f871af8f"
@ -598,22 +430,12 @@ deps = ["LinearAlgebra"]
git-tree-sha1 = "ae3bb1eb3bba077cd276bc5cfc337cc65c3075c0"
uuid = "10745b16-79ce-11e8-11f9-7d13ad32a3b2"
version = "1.11.1"
weakdeps = ["SparseArrays"]
[deps.Statistics.extensions]
SparseArraysExt = ["SparseArrays"]
[[deps.StatsAPI]]
deps = ["LinearAlgebra"]
git-tree-sha1 = "1ff449ad350c9c4cbc756624d6f8a8c3ef56d3ed"
uuid = "82ae8749-77ed-4fe6-ae5f-f523153014b0"
version = "1.7.0"
[[deps.StatsBase]]
deps = ["DataAPI", "DataStructures", "LinearAlgebra", "LogExpFunctions", "Missings", "Printf", "Random", "SortingAlgorithms", "SparseArrays", "Statistics", "StatsAPI"]
git-tree-sha1 = "5cf7606d6cef84b543b483848d4ae08ad9832b21"
uuid = "2913bbd2-ae8a-5f71-8c99-4fb6c76f3a91"
version = "0.34.3"
[deps.Statistics.weakdeps]
SparseArrays = "2f01184e-e22b-5df5-ae63-d93ebab69eaf"
[[deps.StringManipulation]]
deps = ["PrecompileTools"]
@ -621,36 +443,10 @@ git-tree-sha1 = "a6b1675a536c5ad1a60e5a5153e1fee12eb146e3"
uuid = "892a3eda-7b42-436c-8928-eab12a02cf0e"
version = "0.4.0"
[[deps.StructArrays]]
deps = ["ConstructionBase", "DataAPI", "Tables"]
git-tree-sha1 = "9537ef82c42cdd8c5d443cbc359110cbb36bae10"
uuid = "09ab397b-f2b6-538f-b94a-2f83cf4a842a"
version = "0.6.21"
[deps.StructArrays.extensions]
StructArraysAdaptExt = "Adapt"
StructArraysGPUArraysCoreExt = ["GPUArraysCore", "KernelAbstractions"]
StructArraysLinearAlgebraExt = "LinearAlgebra"
StructArraysSparseArraysExt = "SparseArrays"
StructArraysStaticArraysExt = "StaticArrays"
[deps.StructArrays.weakdeps]
Adapt = "79e6a3ab-5dfb-504d-930d-738a2a938a0e"
GPUArraysCore = "46192b85-c4d5-4398-a991-12ede77f4527"
KernelAbstractions = "63c18a36-062a-441e-b654-da1e3ab1ce7c"
LinearAlgebra = "37e2e46d-f89d-539d-b4ee-838fcccc9c8e"
SparseArrays = "2f01184e-e22b-5df5-ae63-d93ebab69eaf"
StaticArrays = "90137ffa-7385-5640-81b9-e52037218182"
[[deps.StyledStrings]]
uuid = "f489334b-da3d-4c2e-b8f0-e476e12c162b"
version = "1.11.0"
[[deps.SuiteSparse_jll]]
deps = ["Artifacts", "Libdl", "libblastrampoline_jll"]
uuid = "bea87d4a-7f5b-5778-9afe-8cc45184846c"
version = "7.7.0+0"
[[deps.TOML]]
deps = ["Dates"]
uuid = "fa267f1f-6049-4f14-aa54-33bafae1ed76"

2
Project.toml
View file

@ -11,7 +11,6 @@ DataFrames = "a93c6f00-e57d-5684-b7b6-d8193f3e46c0"
Dates = "ade2ca70-3891-5945-98fb-dc099432e06a"
Documenter = "e30172f5-a6a5-5a46-863b-614d45cd2de4"
Downloads = "f43a241f-c20a-4ad4-852c-f6b1247861c6"
FHist = "68837c9b-b678-4cd5-9925-8a54edc8f695"
Printf = "de0858da-6303-5e67-8744-51eddeeeb8d7"
SQLite = "0aa819cd-b072-5ff4-a722-6bc24af294d9"
StaticArrays = "90137ffa-7385-5640-81b9-e52037218182"
@ -32,7 +31,6 @@ DataFrames = "1"
Dates = "1.10"
Documenter = "1.7"
Downloads = "1"
FHist = "0.11.7"
InteractiveUtils = "1.10"
Printf = "1.10"
SQLite = "1"

1708
examples/Manifest.toml Normal file
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File diff suppressed because it is too large Load diff

7
examples/Project.toml Normal file
View file

@ -0,0 +1,7 @@
[deps]
CSV = "336ed68f-0bac-5ca0-87d4-7b16caf5d00b"
CairoMakie = "13f3f980-e62b-5c42-98c6-ff1f3baf88f0"
DataFrames = "a93c6f00-e57d-5684-b7b6-d8193f3e46c0"
FHist = "68837c9b-b678-4cd5-9925-8a54edc8f695"
PSBoardDataBase = "779f6a9c-59fa-41f1-8ed1-e9a91eccb2f5"
Unitful = "1986cc42-f94f-5a68-af5c-568840ba703d"

4
examples/pllld_count.jl
View file

@ -1,5 +1,5 @@
### A Pluto.jl notebook ###
# v0.20.3
# v0.20.2
using Markdown
using InteractiveUtils
@ -7,7 +7,7 @@ using InteractiveUtils
# ╔═╡ 635dcf78-b6b3-11ef-3a04-f5b7c43ed12d
begin
using Pkg
Pkg.activate("..")
Pkg.activate(".")
using PSBoardDataBase
using SQLite

17
examples/skew_stats.jl
View file

@ -1,5 +1,5 @@
### A Pluto.jl notebook ###
# v0.20.3
# v0.20.2
using Markdown
using InteractiveUtils
@ -7,7 +7,7 @@ using InteractiveUtils
# ╔═╡ 7c69d12c-80a5-11ef-2674-e155a3483342
begin
using Pkg
Pkg.activate("..")
Pkg.activate(".")
Pkg.status()
true || include("../src/PSBoardDataBase.jl")
end
@ -102,7 +102,8 @@ clk_files =
readdir("../test/input/slavelogs/main/", join = true) |>
filter(endswith("_clk.txt")) |>
filter(!contains("nagoya")) |>
filter(!contains("630_190"))
filter(!contains("630_190")) |>
filter(!contains("627_344"))
# ╔═╡ 3e5607fd-2a8a-4a1a-9e7b-3f23ef216fad
"""
@ -202,7 +203,7 @@ let
title = "clock rise span distribution",
xlabel = "rise up span / ns",
ylabel = "counts",
limits = ((0, 0.18), (0, nothing)),
limits = ((0, 0.33), (0, nothing)),
# xticks = (bins, string.(round.(bins, digits = 3))),
# xticklabelrotation = π / 3,
),
@ -560,7 +561,7 @@ md"""
"""
# ╔═╡ 2a24c277-6679-49f3-b387-6937b7661a25
invalid_measurements = [215, 291, 442, 460, 462, 545, 799, 802, 444, 255, 435]
invalid_measurements = [215, 291, 442, 460, 462, 545, 799, 802, 444, 255, 435, 1213]
# ╔═╡ 13b4112f-96ab-41a1-8ef1-d940771f6ece
df_skews_selected_valids = let
@ -571,6 +572,9 @@ end
# ╔═╡ cf658de8-a4c5-413e-b5e3-56b77a80336f
sort(df_skews_selected, :width)
# ╔═╡ 7efd380b-a976-4a86-8dff-8afd551f03fb
sort(df_skews_selected, :width, rev = true)
# ╔═╡ 6a856a55-2611-41d0-a2c7-3645c066fc3c
begin
@assert all(!ismissing, df_skews_selected_valids.skew)
@ -729,7 +733,7 @@ let
sqrt(count * (1000 - count) / 1000)
end
label, color = if psbid == psbid_width_max
"lomgest ($psbid)", (:red, 0.8)
"longest ($psbid)", (:red, 0.8)
elseif psbid == psbid_width_min
"shortest ($psbid)", (:blue, 0.8)
elseif psbid == psbid_width_typical
@ -812,6 +816,7 @@ end
# ╠═2a24c277-6679-49f3-b387-6937b7661a25
# ╠═13b4112f-96ab-41a1-8ef1-d940771f6ece
# ╠═cf658de8-a4c5-413e-b5e3-56b77a80336f
# ╠═7efd380b-a976-4a86-8dff-8afd551f03fb
# ╠═6a856a55-2611-41d0-a2c7-3645c066fc3c
# ╠═4a4ef945-b312-44ed-ab62-ce01fc33f926
# ╠═46b2a3cd-d2e6-4277-8b65-9c61f25f69e8