Merge branch 'pluto_nvim' of github.com:qwjyh/dotfiles into pluto_nvim

README.md

@@ -7,18 +7,16 @@ my dotfiles
   - AHK macro
   - wezterm
   - etc
-- Arch
+- Ubuntu 20.04 on WSL
+  - fish
+- Arch/Manjaro
   - fish
   - tmux
   - neovim
   - keyboard config(xremap)
   - wezterm
-- Ubuntu 22.04 on WSL
-  - fish
-- Termux
 
 ## extra
-- qpdfview
 - okular
 
 # Installing
@@ -31,20 +29,11 @@ my dotfiles
 6. run `bin/install.ps1`
 
 ### note
-* manually install lean
+* manual install lean
 
 ## Linux
-1. run install.sh
+1. install fish
-
+2. run install.sh
-# Neovim
-
-## Julia
-### Initial setup
-- `./bin/neovim/setup_julials.jl` to set up environment with LanguageServer.jl
-<!-- - Edit `init.lua` not to use sysimage and edit some julia code -->
-- `./bin/neovim/update_julials.jl` to generate sysimage for faster startup time
-
-Edit `init.lua` to change arguments for julials.
 
 # TODO
 - Iron.nvim doesn't work for julia on Windows

bin/install.ps1

@@ -58,7 +58,6 @@ New-Item -ItemType SymbolicLink -Path ~\AppData\Local\nvim\lua\lspconfig\server_
 mkdir $env:LOCALAPPDATA\nvim\after\ftplugin
 New-Item -ItemType SymbolicLink -Path $env:LOCALAPPDATA\nvim\after\ftplugin\satysfi.lua -Target (Resolve-Path .\dotfiles\neovim\after\ftplugin\satysfi.lua)
 New-Item -ItemType SymbolicLink -Path $env:LOCALAPPDATA\nvim\after\ftplugin\tex.lua -Target (Resolve-Path .\dotfiles\neovim\after\ftplugin\tex.lua)
-New-Item -ItemType SymbolicLink -Path $env:LOCALAPPDATA\nvim\after\ftplugin\typst.lua -Target (Resolve-Path .\dotfiles\neovim\after\ftplugin\typst.lua)
 mkdir $env:LOCALAPPDATA\nvim\after\queries\satysfi
 Invoke-WebRequest -Uri "https://raw.githubusercontent.com/monaqa/tree-sitter-satysfi/master/queries/highlights.scm" -OutFile $env:LOCALAPPDATA\nvim\after\queries\satysfi\highlights.scm
 Invoke-WebRequest -Uri "https://raw.githubusercontent.com/monaqa/tree-sitter-satysfi/master/queries/indents.scm" -OutFile $env:LOCALAPPDATA\nvim\after\queries\satysfi\indents.scm
@@ -77,7 +76,4 @@ New-Item -ItemType SymbolicLink -Path ~\.config\wezterm\wezterm.lua -Target (Res
 # julia
 mkdir ~\.config\julia\config
 New-Item -ItemType SymbolicLink -Path ~\.julia\config\startup.jl -Target (Resolve-Path .\dotfiles\startup_windows.jl) -Force
-# lf
-mkdir $env:LOCALAPPDATA\lf
-New-Item -ItemType SymbolicLink -Path $env:LOCALAPPDATA\lf\lfrc -Target (Resolve-Path .\dotfiles\lf\lfrc) -Force
 

bin/install.sh

@@ -31,7 +31,6 @@ ln -sf $(pwd)/dotfiles/neovim/lua/lspconfig/server_configurations/satysfi_ls.lua
 mkdir -p ~/.config/nvim/after/ftplugin
 ln -sf $(pwd)/dotfiles/neovim/after/ftplugin/satysfi.lua ~/.config/nvim/after/ftplugin/satysfi.lua
 ln -sf $(pwd)/dotfiles/neovim/after/ftplugin/tex.lua ~/.config/nvim/after/ftplugin/tex.lua
-ln -sf $(pwd)/dotfiles/neovim/after/ftplugin/typst.lua ~/.config/nvim/after/ftplugin/typst.lua
 mkdir -p ~/.config/nvim/after/queries/satysfi
 curl -o ~/.config/nvim/after/queries/satysfi/highlights.scm https://raw.githubusercontent.com/monaqa/tree-sitter-satysfi/master/queries/highlights.scm
 curl -o ~/.config/nvim/after/queries/satysfi/indents.scm https://raw.githubusercontent.com/monaqa/tree-sitter-satysfi/master/queries/indents.scm
@@ -45,8 +44,3 @@ ln -sf $(pwd)/dotfiles/neovim/luasnippets/satysfi/math.lua ~/.config/nvim/luasni
 
 mkdir -p ~/.julia/config
 ln -sf $(pwd)/dotfiles/startup_linux.jl ~/.julia/config/startup.jl
-
-mkdir -p ~/.config/lf
-ln -sf $(pwd)/dotfiles/lf/lfrc ~/.config/lf/lfrc
-
-ln -sf $(pwd)/dotfiles/bat/config "$(bat --config-file)"

bin/neovim/add_dependencies.jl

@@ -13,7 +13,7 @@ foreach(Pkg.add, pkg_ls_deps)
 
 # add extra dependencies
 # these packages are manually collected
-pkg_extra = ["Logging", "Sockets", "DataStructures", "Tar", "ArgTools", "Dates", "Downloads", "TOML"]
+pkg_extra = ["Logging", "Sockets", "DataStructures", "Tar", "ArgTools", "Dates", "Downloads"]
 foreach(Pkg.add, pkg_extra)
 @info "dependency added"
 
@@ -24,9 +24,6 @@ open(out_path, "w") do io
     println(io, "using LanguageServer")
     println(io, "using " * join(pkg_ls_deps, ", "))
     println(io, "using " * join(pkg_extra, ", "))
-    if Sys.iswindows()
-        println(io, "import FileWatching")
-    end
 end
 @info "finished writing precompile head file"
 

bin/neovim/readme.md

@@ -1,24 +1,27 @@
 # How to manage Julia Language Server
-This config use sysimage built with PackageCompiler to make language server starts faster.
+This config use sysimage built with PackageCompiler to make language server startup faster.
-Scripts in this directory are for management of the sysimage.
+Scripts in this directory is for management of sysimage.
 
 # description
 all related process is done in project at `~/.julia/environments/nvim-lspconfig/`.
 
-## install (or minor update of Julia)
+## startup
 ```sh
-julia ./setup_julials.jl
+$ ./setup_julials.sh
 ```
-Run Language Server with `--tracecompile` option from any editor.
+which executes `add_dependencies.jl` internally.
 
 ## update
 ```sh
-julia ./update_julials.sh
+$ ./update_julials.sh
 ```
 which updates project, compile sysimage, then do precompile.
-To use the sysimage, run Language Server with `-J ~/.julia/environments/nvim-lspconfig/` option.
 
 # effect
 Start up got about x3 - x4 faster.
 It still takes some time to load packages though.
 
+# TODO
+- [ ] Not sure all necessary packages are listed in add_dependencies.jl
+- [ ] Maybe it's better to set up different sysimages for each projects
+

bin/neovim/setup_julials.jl

@@ -1,9 +1,14 @@
 #!/usr/bin/julia
 project_path = joinpath(homedir(), ".julia", "environments", "nvim-lspconfig")
 if !ispath(project_path)
-    mkdir(project_path)
+    try
-    @info "Created $(project_path)"
+        mkdir(project_path)
-    touch(joinpath(project_path, "tracecompile.jl"))
+        @info "Created $(project_path)"
+    catch e
+        @error e
+        @error dump(e)
+        throw(e)
+    end
 end
 cmd = `julia --project=$(project_path) $(@__DIR__)/add_dependencies.jl`
 @info cmd

bin/neovim/setup_julials.sh

@@ -0,0 +1,2 @@
+#!/usr/bin/bash -x
+julia --project=~/.julia/environments/nvim-lspconfig ./add_dependencies.jl

bin/neovim/update_julials.jl

@@ -1,16 +1,14 @@
 #!/usr/bin/julia
 project_path = joinpath(homedir(), ".julia", "environments", "nvim-lspconfig")
-cd(project_path) do
+cd(project_path)
-    @info "now at " pwd()
+@info "now at " pwd()
-    run(`julia --project=. -e 'using Pkg; Pkg.update()'`)
+run(`julia --project=. -e 'using Pkg; Pkg.update()'`)
-    compile_traces = Iterators.filter(eachline("tracecompile.jl")) do line
+compile_traces = Iterators.filter(eachline("tracecompile.jl")) do line
-        # Remove anonymous functions from compile trace
+    !startswith(line, '#') && !occursin(r"\#\d+\#\d+", line)
-        !startswith(line, '#') && !occursin(r"\#\d+\#\d+", line) && !occursin(r"\#\#printstyled\#", line)
+end |> join
-    end |> join
+read("precompile_exec_head.jl", String) * compile_traces |> (b -> write("precompile_exec.jl", b))
-    read("precompile_exec_head.jl", String) * compile_traces |> (b -> write("precompile_exec.jl", b))
+@info "compiling sysimage..."
-    @info "compiling sysimage..."
+run(`julia --project=. -e 'using PackageCompiler; create_sysimage(["LanguageServer"], sysimage_path = "sys-ls.so", precompile_execution_file = ["precompile_exec.jl"])'`)
-    run(`julia --project=. -e 'using PackageCompiler; create_sysimage(["LanguageServer"], sysimage_path = "sys-ls.so", precompile_execution_file = ["precompile_exec.jl"])'`)
+@info "post precompile"
-    @info "post precompile"
+run(`julia --project=. -J sys-ls.so -e 'using Pkg; Pkg.precompile()'`)
-    run(`julia --project=. -J sys-ls.so -e 'using Pkg; Pkg.precompile()'`)
-end
 

bin/neovim/update_julials.sh

@@ -0,0 +1,7 @@
+#!/usr/bin/bash -x
+cd ~/.julia/environments/nvim-lspconfig/ || return 1
+julia --project=. -e 'using Pkg; Pkg.update()'
+cat precompile_exec_head.jl tracecompile.jl > precompile_exec.jl
+julia --project=. -e 'using PackageCompiler; create_sysimage(["LanguageServer"], sysimage_path="sys-ls.so", precompile_execution_file=["precompile_exec.jl"])'
+julia --project=. -J sys-ls.so -e 'using Pkg; Pkg.precompile()'
+

dotfiles/bat/config

@@ -1,4 +0,0 @@
-# use Catppuccin for bat
-# https://github.com/catppuccin/bat
-# Installation instruction on the readme
---theme="Catppuccin Latte"

dotfiles/fish/config.fish

@@ -18,7 +18,6 @@ if status is-interactive
     # abbr (from 3.6, --universal is removed)
     abbr -a -- l less
     abbr -a -- ll 'eza -la --icons --git'
-    abbr -a -- qpv 'qpdfview --unique'
 
     zoxide init fish | source
 

dotfiles/lf/lfrc

@@ -1,23 +0,0 @@
-cmap <tab> cmd-menu-complete
-cmap <backtab> cmd-menu-complete-back
-
-## https://github.com/gokcehan/lf/wiki/Integrations#eza
-#cmd on-select &{{
-#    lf -remote "send $id set statfmt \"$(eza -ld --color=always "$f" | sed 's/\\/\\\\/g;s/"/\\"/g')\""
-#}}
-#
-#cmd git_branch ${{
-#    git branch | fzf | xargs git checkout
-#    pwd_shell="$(pwd | sed 's/\\/\\\\/g;s/"/\\"/g')"
-#    lf -remote "send $id updir; cd \"$pwd_shell\""
-#}}
-#map gb :git_branch
-#map gp $clear; git pull --rebase || true; echo "press ENTER"; read ENTER
-#map gs $clear; git status; echo "press ENTER"; read ENTER
-#map gl $clear; git log --graph --pretty=format:'%Cred%h%Creset -%C(yellow)%d%Creset %s %Cgreen(%cr) %C(bold blue)<%an>%Creset' --abbrev-commit
-#
-#cmd on-cd &{{
-#    fmt="$(STARSHIP_SHELL= starship prompt | sed 's/\\/\\\\/g;s/"/\\"/g')"
-#    lf -remote "send $id set promptfmt \"$fmt\""
-#}}
-

dotfiles/neovim/after/queries/julia/injections.scm

@@ -5,42 +5,3 @@
   (#eq? @_prefix "md")
   (#set! injection.language "markdown")
   (#offset! @injection.content 0 2 0 -1))
-
-; ((prefixed_string_literal
-;   prefix: (identifier) @_prefix) @injection.content
-;   (#eq? @_prefix "sql")
-;   (#set! injection.language "sql")
-;   (#offset! @injection.content 0 4 0 -1))
-;
-; ((prefixed_string_literal
-;   prefix: (identifier) @_prefix) @injection.content
-;   (#eq? @_prefix "s")
-;   (#set! injection.language "sql")
-;   (#offset! @injection.content 0 3 0 -1))
-;
-; ((prefixed_string_literal
-;   prefix: (identifier) @_prefix) @injection.content
-;   (#eq? @_prefix "t")
-;   (#set! injection.language "regex")
-;   (#offset! @injection.content 0 2 0 -1))
-;
-; ((prefixed_string_literal
-;   prefix: (identifier) @_prefix) @injection.content
-;   (#eq? @_prefix "ts")
-;   (#set! injection.language "regex")
-;   (#offset! @injection.content 0 2 0 -1))
-;
-; ((prefixed_string_literal
-;   prefix: (identifier) @_prefix) @injection.content
-;   (#eq? @_prefix "tu")
-;   (#set! injection.language "regex")
-;   (#offset! @injection.content 0 3 0 -1))
-;
-; ((prefixed_string_literal
-;   prefix: (identifier) @_prefix) @injection.content
-;   (#eq? @_prefix "sql")
-;   ; (#offset! @injection.content 0 2 0 -1)
-;   ; (#offset! @injection.content 0 6 0 -3)
-;   (#gsub! @injection.content "^\"%\"" "%1")
-;   (#set! injection.language "sql")
-;   )

dotfiles/neovim/init.lua

@@ -1,7 +1,7 @@
 -----------------------------------------------------------
 -- Installing plugin manager 'lazy.nvim'
 local lazypath = vim.fn.stdpath("data") .. "/lazy/lazy.nvim"
-if not (vim.uv or vim.loop).fs_stat(lazypath) then
+if not vim.loop.fs_stat(lazypath) then
     vim.fn.system({
         "git",
         "clone",
@@ -28,6 +28,16 @@ require('lazy').setup({
             }
         end
     },
+    {
+        dir = "./lua/pluto_nvim.lua",
+        config = function()
+            -- temp global for dev
+            pluto_nvim = require("pluto_nvim")
+            require("pluto_nvim").setup {}
+        end,
+        lazy = true,
+        ft = { 'julia' },
+    },
     {
         'folke/which-key.nvim',
         config = function()
@@ -56,21 +66,7 @@ require('lazy').setup({
     },
     { -- lualine(statusline)
         'nvim-lualine/lualine.nvim',
-        dependencies = { 'nvim-tree/nvim-web-devicons', lazy = true }
+        dependencies = { 'kyazdani42/nvim-web-devicons', lazy = true }
-    },
-    {
-        'shellRaining/hlchunk.nvim',
-        event = { "BufReadPre", "BufNewFile" },
-        config = function()
-            require('hlchunk').setup {
-                chunk = {
-                    enable = true,
-                },
-                line_num = {
-                    enable = true,
-                },
-            }
-        end
     },
     {
         'lervag/vimtex',
@@ -145,40 +141,7 @@ require('lazy').setup({
     },
     {
         'folke/trouble.nvim',
-        opts = {},
+        -- config = function
-        cmd = "Trouble",
-        keys = {
-            {
-                "<space>xx",
-                "<cmd>Trouble diagnostics toggle<cr>",
-                desc = "Diagnostics (Trouble)",
-            },
-            {
-                "<space>xX",
-                "<cmd>Trouble diagnostics toggle filter.buf=0<cr>",
-                desc = "Buffer Diagnostics (Trouble)",
-            },
-            {
-                "<space>cs",
-                "<cmd>Trouble symbols toggle focus=false<cr>",
-                desc = "Symbols (Trouble)",
-            },
-            {
-                "<space>cl",
-                "<cmd>Trouble lsp toggle focus=false win.position=bottom<cr>",
-                desc = "LSP Definitions / references / ... (Trouble)",
-            },
-            {
-                "<space>xL",
-                "<cmd>Trouble loclist toggle<cr>",
-                desc = "Location List (Trouble)",
-            },
-            {
-                "<space>xQ",
-                "<cmd>Trouble qflist toggle<cr>",
-                desc = "Quickfix List (Trouble)",
-            },
-        },
     },
     {
         'Julian/lean.nvim',
@@ -244,100 +207,9 @@ require('lazy').setup({
             require('orgmode').setup({
                 org_agenda_files = '~/orgfiles/**/*',
                 org_default_notes_file = '~/orgfiles/refile.org',
-                org_todo_keywords = {
-                    "TODO(t)",
-                    "PLAN(p)",
-                    "NEXT(n)",
-                    "|",
-                    "DONE(d)",
-                    "CANCELED(c)",
-                },
-                org_todo_keyword_faces = {
-                    -- TODO = ":foreground red",
-                    PLAN = ":foreground #F0BB61",
-                    NEXT = ":background #663333 :foreground #E0A0A0",
-                    CANCELED = ":foreground #99AA99",
-                },
-                org_archive_location = '~/orgfiles/archives/%s_archive::',
-                org_adapt_indentation = false,
-                org_id_link_to_org_use_id = true,
-                org_capture_templates = {
-                    t = {
-                        description = "Task",
-                        template = '* TODO %?\n%u'
-                    },
-                    l = {
-                        description = "Log",
-                        template = '* %?\n%U'
-                    },
-                    j = {
-                        description = "Journal",
-                        template = '* %?\n%U',
-                        target = '~/orgfiles/journal.org',
-                    },
-                },
             })
         end,
     },
-    {
-        'chomosuke/typst-preview.nvim',
-        ft = 'typst',
-        version = 'v1.*',
-        build = function()
-            require 'typst-preview'.update()
-        end,
-        config = function()
-            require 'typst-preview'.setup {
-                -- Setting this true will enable printing debug information with print()
-                debug = false,
-
-                -- Custom format string to open the output link provided with %s
-                -- Example: open_cmd = 'firefox %s -P typst-preview --class typst-preview'
-                open_cmd = nil,
-
-                -- Setting this to 'always' will invert black and white in the preview
-                -- Setting this to 'auto' will invert depending if the browser has enable
-                -- dark mode
-                -- Setting this to '{"rest": "<option>","image": "<option>"}' will apply
-                -- your choice of color inversion to images and everything else
-                -- separately.
-                invert_colors = 'never',
-
-                -- Whether the preview will follow the cursor in the source file
-                follow_cursor = true,
-
-                -- Provide the path to binaries for dependencies.
-                -- Setting this will skip the download of the binary by the plugin.
-                -- Warning: Be aware that your version might be older than the one
-                -- required.
-                dependencies_bin = {
-                    ['tinymist'] = nil,
-                    ['websocat'] = nil
-                },
-
-                -- A list of extra arguments (or nil) to be passed to previewer.
-                -- For example, extra_args = { "--input=ver=draft", "--ignore-system-fonts" }
-                extra_args = nil,
-
-                -- This function will be called to determine the root of the typst project
-                get_root = function(path_of_main_file)
-                    -- Use root of git repository as a --root for typst
-                    local rootpath = vim.fs.root(path_of_main_file, '.git')
-                    if rootpath then
-                        return rootpath
-                    else
-                        return vim.fn.fnamemodify(path_of_main_file, ':p:h')
-                    end
-                end,
-
-                -- This function will be called to determine the main file of the typst
-                -- project.
-                get_main_file = function(path_of_buffer)
-                    return path_of_buffer
-                end,
-            }
-        end
-    },
 })
 
 -----------------------------------------------------------
@@ -389,7 +261,7 @@ vim.keymap.set('n', 'L', '<cmd>tabn<cr>', { desc = 'tab next' })
 require('catppuccin').setup({
     transparent_background = true,
 })
-vim.cmd.colorscheme "catppuccin-latte"
+vim.cmd.colorscheme "catppuccin"
 
 -----------------------------------------------------------
 vim.g.mapleader = ' '
@@ -490,9 +362,6 @@ local builtin = require('telescope.builtin')
 vim.keymap.set('n', '<leader>ff', function() builtin.find_files { sort_lastused = true } end, { desc = "find files" })
 vim.keymap.set('n', '<leader>fw', builtin.lsp_workspace_symbols, { desc = "lsp workspace symbols" })
 vim.keymap.set('n', '<leader>fd', builtin.lsp_document_symbols, { desc = "lsp document symbols" })
-vim.keymap.set('n', '<leader>flr', builtin.lsp_references, { desc = "lsp references for word" })
-vim.keymap.set('n', '<leader>fli', builtin.lsp_incoming_calls, { desc = "lsp incoming calls" })
-vim.keymap.set('n', '<leader>flo', builtin.lsp_outgoing_calls, { desc = "lsp outgoing calls" })
 vim.keymap.set('n', '<leader>fb', builtin.buffers, { desc = "buffers" })
 vim.keymap.set('n', '<leader>fg', builtin.live_grep, { desc = "grep" })
 vim.keymap.set('n', '<leader>fh', builtin.help_tags, { desc = "help tags" })
@@ -615,6 +484,8 @@ local lspconfig = require 'lspconfig'
 -- See `:help vim.diagnostic.* for documentation on any of the below functions
 local opts = { noremap = true, silent = true }
 vim.keymap.set('n', '<space>e', vim.diagnostic.open_float, opts)
+vim.keymap.set('n', '[d', vim.diagnostic.goto_prev, opts)
+vim.keymap.set('n', ']d', vim.diagnostic.goto_next, opts)
 vim.keymap.set('n', '<space>q', vim.diagnostic.setloclist, opts)
 
 -- Use an on_attach function to only map the following keys
@@ -689,7 +560,6 @@ lspconfig.julials.setup {
         -- use below 2 lines to collect script to be included in sysimage
         -- '--trace-compile',
         -- vim.env.HOME .. "/.julia/environments/nvim-lspconfig/tracecompile.jl",
-        "-t4",
         "-e",
         [[
             # Load LanguageServer.jl: attempt to load from ~/.julia/environments/nvim-lspconfig
@@ -726,7 +596,6 @@ lspconfig.julials.setup {
         ]] }
 }
 -- SATySFi
-require 'lspconfig.server_configurations.satysfi_ls'
 lspconfig.satysfi_ls.setup {
     on_attach = on_attach,
     capabilities = capabilities,
@@ -738,10 +607,8 @@ lspconfig.bashls.setup {
     capabilities = capabilities,
 }
 -- pwsh
-local win_pwsh_es_path = '~/scoop/apps/powershell-editorservice/current'
-local arch_pwsh_es_path = "/opt/powershell-editor-services/"
 lspconfig.powershell_es.setup {
-    bundle_path = vim.fn.has('win32') == 1 and win_pwsh_es_path or arch_pwsh_es_path,
+    bundle_path = '~/scoop/apps/powershell-editorservice/current',
     capabilities = capabilities,
 }
 -- ccls
@@ -750,13 +617,7 @@ lspconfig.powershell_es.setup {
 --     cmd = {'omnisharp'},
 -- }
 
--- lspconfig.typst_lsp.setup {
+lspconfig.typst_lsp.setup {
---     on_attach = on_attach,
---     capabilities = capabilities,
---     single_file_support = true,
--- }
-
-lspconfig.tinymist.setup {
     on_attach = on_attach,
     capabilities = capabilities,
     single_file_support = true,
@@ -774,8 +635,8 @@ lspconfig.rust_analyzer.setup {
     }
 }
 
-local lss = { "pyright", "texlab", --[[ "ccls", ]] "clangd", "ts_ls", --[["tailwindcss"]] "hls", "cmake",
+local lss = { "pyright", "texlab", "ccls", "clangd", "tsserver", --[["tailwindcss"]] "hls", "cmake",
-    "csharp_ls", "html", "r_language_server", "cssls", "jsonls", "sqls", "vhdl_ls", "ruff", "lemminx" }
+    "csharp_ls", "html", "r_language_server", "ruff_lsp", "cssls", "jsonls", "sqls" }
 for _, ls in pairs(lss) do
     lspconfig[ls].setup {
         on_attach = on_attach,

dotfiles/neovim/lua/lspconfig/server_configurations/satysfi_ls.lua

@@ -1,20 +1,21 @@
 -- https://zenn.dev/monaqa/articles/2021-12-10-satysfi-language-server
-local configs = require 'lspconfig.configs'
+local util = require 'lspconfig.util'
 
-configs.satysfi_ls = {
+return {
+  default_config = {
+    cmd = { 'satysfi-language-server' },
+    filetypes = { 'satysfi' },
+    root_dir = util.root_pattern('.git'),
+    single_file_support = true,
+  },
+  docs = {
+    description = [[
+      https://github.com/monaqa/satysfi-language-server
+      Language server for SATySFi.
+      ]],
     default_config = {
-        cmd = { 'satysfi-language-server' },
+      root_dir = [[root_pattern(".git")]],
-        filetypes = { 'satysfi' },
-        root_dir = vim.fs.root(0, ".git"),
-        single_file_support = true,
-    },
-    docs = {
-        description = [[
-        https://github.com/monaqa/satysfi-language-server
-        Language server for SATySFi.
-        ]],
-        default_config = {
-            root_dir = [[root_pattern(".git")]],
-        },
     },
+  },
 }
+

dotfiles/neovim/lua/lualine_setup.lua

@@ -1,7 +1,7 @@
 -- https://qiita.com/uhooi/items/99aeff822d4870a8e269
 local lsp_names = function ()
     local clients = {}
-    for _, client in ipairs(vim.lsp.get_clients({ bufnr = 0})) do
+    for _, client in ipairs(vim.lsp.get_active_clients({ bufnr = 0})) do
         table.insert(clients, client.name)
     end
     return ' ' .. table.concat(clients, ', ')

dotfiles/neovim/lua/pluto_nvim.lua

@@ -0,0 +1,230 @@
+local job = require('plenary.job')
+local M = {}
+
+local NOTEBOOK_HEADER = "### A Pluto.jl notebook ###"
+local BLOCK_START = "# ╔═╡ "
+local CELLORDER_START = "# ╔═╡ Cell order:"
+local CELLORDER_VISIBLE_BODY = "# ╠═"
+local CELLORDER_HIDDEN_BODY = "# ╟─"
+
+local function node_is_pluto_prefix(node)
+    if node:type() ~= "line_comment" then
+        return false
+    end
+    local row, col, _ = node:start()
+    local comment_text = vim.api.nvim_buf_get_lines(0, row, row + 1, true)
+    -- print("TEXT: ", comment_text[1])
+    return nil ~= string.match(comment_text[1], BLOCK_START) and nil == string.match(comment_text[1], CELLORDER_START)
+end
+
+---Get iterator of TSnodes of cell prefix comments
+---@return function
+function M.get_cell_prefix_nodes()
+    local curnode = vim.treesitter.get_node()
+    local top_nodes = curnode:root():iter_children()
+    return function()
+        while true do
+            local node = top_nodes()
+            if node == nil then
+                return nil
+            end
+            if node_is_pluto_prefix(node) then
+                return node
+            end
+        end
+    end
+end
+
+local function node_is_cell_order(node)
+    if node:type() ~= "line_comment" then
+        return false
+    end
+    local row, col, _ = node:start()
+    local comment_text = vim.api.nvim_buf_get_lines(0, row, row + 1, true)
+    -- print("TEXT: ", comment_text[1])
+    return nil ~= string.match(comment_text[1], CELLORDER_START) or
+        nil ~= string.match(comment_text[1], CELLORDER_VISIBLE_BODY) or
+        nil ~= string.match(comment_text[1], CELLORDER_HIDDEN_BODY)
+end
+
+function M.get_cell_order_nodes()
+    local curnode = vim.treesitter.get_node()
+    local top_nodes = curnode:root():iter_children()
+    return function()
+        while true do
+            local node = top_nodes()
+            if node == nil then
+                return nil
+            end
+            if node_is_cell_order(node) then
+                return node
+            end
+        end
+    end
+end
+
+---Get prefix TSNode of current cell
+---@return TSNode?
+local function get_current_cell_prefix_node()
+    local curnode = vim.treesitter.get_node()
+    if curnode == nil then
+        print("Not in a cell")
+        return nil
+    end
+    while curnode:parent():type() ~= "source_file" do
+        print("curnode", curnode:range())
+        curnode = curnode:parent()
+    end
+    local prefix_node
+    if node_is_pluto_prefix(curnode) then
+        prefix_node = curnode
+    elseif curnode:prev_sibling() ~= nil and node_is_pluto_prefix(curnode:prev_sibling()) then
+        prefix_node = curnode:prev_sibling()
+    else
+        print("Not a valid cell")
+        print("current node", curnode:type(), curnode:range())
+        return nil
+    end
+    return prefix_node
+end
+
+local function get_uuid(node)
+    local row, col, _ = node:start()
+    local comment_text = vim.api.nvim_buf_get_lines(0, row, row + 1, true)
+    -- print("text", comment_text[1])
+    local _, _, uuid = string.find(comment_text[1], "(%x+-%x+-%x+-%x+-%x+)")
+    return uuid
+end
+
+---Get uuid of the current cell.
+---@return string?
+function M.get_current_cell_uuid()
+    local prefix_node = get_current_cell_prefix_node()
+    if prefix_node == nil then return nil end
+    return get_uuid(prefix_node)
+end
+
+local function get_cellbody_node(uuid)
+    for node in M.get_cell_prefix_nodes() do
+        if uuid == get_uuid(node) then
+            return node
+        end
+    end
+end
+
+---Generate uuid1 using Julia.
+---@return string
+local function uuid1()
+    local generated
+    job:new({
+        command = "julia",
+        args = { "-e", "using UUIDs; print(uuid1())" },
+        on_exit = function(j, return_val)
+            if return_val ~= 0 then
+                print("error processing UUID", return_val, vim.inspect(j:result()))
+            end
+            generated = j:result()[1]
+        end,
+    }):sync()
+    return generated
+end
+
+---Get row number of the cell order entry which corresponds to the current cell
+---@param curuuid string
+---@return integer?
+local function get_cell_order_node(curuuid)
+    local ordernode_row
+    for ordernode in M.get_cell_order_nodes() do
+        local srow, scol, erow, ecol = ordernode:range()
+        local str = vim.api.nvim_buf_get_text(0, srow, scol, erow, ecol, {})
+        local _, _, ordernode_uuid = string.find(str[1], "(%x+-%x+-%x+-%x+-%x+)")
+        if ordernode_uuid == curuuid then
+            -- print("Matched: ", curuuid, srow, erow)
+            ordernode_row = srow
+        end
+    end
+    return ordernode_row
+end
+
+function M.insert_cell_below()
+    local curuuid = M.get_current_cell_uuid()
+    if curuuid == nil then
+        return nil
+    end
+    local newuuid = uuid1()
+    local ordernode_row = get_cell_order_node(curuuid)
+    vim.api.nvim_buf_set_lines(0, ordernode_row + 1, ordernode_row + 1, true, {
+        CELLORDER_VISIBLE_BODY .. newuuid
+    })
+    local prefix_node = get_current_cell_prefix_node()
+    if prefix_node == nil then
+        return nil
+    end
+    local _, _, end_row, _ = prefix_node:next_sibling():range()
+    vim.api.nvim_buf_set_lines(0, end_row + 1, end_row + 1, true, {
+        "",
+        BLOCK_START .. newuuid,
+        "",
+    })
+    vim.api.nvim_win_set_cursor(0, { end_row + 4, 0 })
+end
+
+function M.goto_cellorder_entry()
+    local curuuid = M.get_current_cell_uuid()
+    if not curuuid then return nil end
+    local ordernode_row = get_cell_order_node(curuuid)
+    vim.cmd("norm! m`")
+    vim.api.nvim_win_set_cursor(0, { ordernode_row + 1, 0 })
+end
+
+function M.goto_cell_body()
+    local line_str = vim.api.nvim_get_current_line()
+    local _, _, uuid = string.find(line_str, "(%x+-%x+-%x+-%x+-%x+)")
+    if uuid == nil then
+        print("This line doesn't have valid id")
+        return nil
+    end
+    local body_node = get_cellbody_node(uuid)
+    local start_row, _, _, _ = body_node:range()
+    vim.cmd("norm! m`")
+    vim.api.nvim_win_set_cursor(0, { start_row + 2, 0 })
+end
+
+function M.toggle_visibility()
+    local curuuid = M.get_current_cell_uuid()
+    if not curuuid then return nil end
+    local ordernode_row = get_cell_order_node(curuuid)
+    local ordernode_text = vim.api.nvim_buf_get_lines(0, ordernode_row, ordernode_row + 1, true)[1]
+    if string.find(ordernode_text, CELLORDER_VISIBLE_BODY) then
+        vim.api.nvim_buf_set_text(0, ordernode_row, 0, ordernode_row, 4, { CELLORDER_HIDDEN_BODY })
+    elseif string.find(ordernode_text, CELLORDER_HIDDEN_BODY) then
+        vim.api.nvim_buf_set_text(0, ordernode_row, 0, ordernode_row, 4, { CELLORDER_VISIBLE_BODY })
+    end
+end
+
+function M.setup(opts)
+    vim.api.nvim_create_user_command('PlutoGoToCellOrder', M.goto_cellorder_entry, {
+        nargs = 0,
+        desc = "Go to the cell order entry which corresponds to the current cell",
+    })
+    vim.api.nvim_create_user_command('PlutoGoToCellBody', M.goto_cell_body, {
+        nargs = 0,
+        desc = "Go to the cell body which corresponds to the current order entry",
+    })
+    vim.api.nvim_create_user_command('PlutoToggleVisibility', M.toggle_visibility, {
+        nargs = 0,
+        desc = "Toggle visiblity of the current cell",
+    })
+    -- require('nvim-treesitter.configs').setup {
+    --     textobjects = {
+    --         select = {
+    --             enable = true,
+    --             keymaps = {
+    --                 ["ac"] = "@cell.outer",
+    --             },
+    --         },
+    --     },
+    -- }
+end
+
+return M

dotfiles/pwsh/powershell_profile.ps1

@@ -231,3 +231,7 @@ Import-Module WSLTabCompletion
 
 Get-ChildItem ~\.config\powershell\completions\ | % { . $_ }
 
+# Automatically appended by pdm scoop package
+Get-ChildItem "$PROFILE\..\Completions\" | ForEach-Object {
+    . $_.FullName
+}

dotfiles/startup_linux.jl

@@ -1,8 +1,6 @@
 try
     using OhMyREPL
     enable_autocomplete_brackets(false)
-    include("catppuccin.jl")
-    OhMyREPL.colorscheme!("CatppuccinLatte")
 catch e
     @warn "Failed to load OhMyREPL"
 end

dotfiles/tmux.conf

@@ -2,7 +2,7 @@
 
 source ~/.local.tmux.conf
 # -----------------------------------------------
-set -g history-limit 50000
+set -g history-limit 500000
 
 set-option -g default-command fish
 

dotfiles/wezterm/wezterm.lua

@@ -44,16 +44,15 @@ return {
     --        }
     --    },
 
-    -- color_scheme = "iceberg-dark",
+    color_scheme = "iceberg-dark",
-    color_scheme = "catppuccin-latte",
     use_fancy_tab_bar = false,
     tab_bar_at_bottom = true,
     window_background_opacity = 0.85,
     -- font = wezterm.font 'FirgeNerd Console'
     font = wezterm.font_with_fallback {
         {
-            family = 'Juisee HWNF',
+            family = 'JuiseeHW Nerd Font',
-            weight = 'Regular',
+            weight = 'Bold',
             harfbuzz_features = {
                 'calt=0', -- disables ligature
                 'zero=1',

extra_configs/qpdfview/update_config.py

@@ -1,73 +0,0 @@
-#!/usr/bin/env python
-"""
-Modify qpdfview config.
-"""
-
-import configparser
-import os
-import shutil
-
-# =======================================================================================
-
-QPDFVIEW_CONFIGDIR = os.path.expanduser("~/.config/qpdfview/")
-if not os.path.exists(QPDFVIEW_CONFIGDIR):
-    print("qpdfview config directory not found.")
-    print("Install qpdfview first and rerun this script.")
-    print("Exiting...")
-    exit(1)
-
-# =======================================================================================
-
-QPDFVIEW_CONFIG_CONFIG = QPDFVIEW_CONFIGDIR + "qpdfview.conf"
-print(f"{QPDFVIEW_CONFIG_CONFIG=}")
-
-if os.path.exists(QPDFVIEW_CONFIG_CONFIG):
-    shutil.copyfile(QPDFVIEW_CONFIG_CONFIG, QPDFVIEW_CONFIG_CONFIG + ".orig")
-
-config = configparser.RawConfigParser()
-config.optionxform = lambda optionstr: optionstr
-config.read(QPDFVIEW_CONFIG_CONFIG)
-
-config["documentView"]["autoRefresh"] = "true"
-config["documentView"]["highlightAll"] = "true"
-config["documentView"]["highlightCurrentThumbnail"] = "true"
-config["documentView"]["highlightDuration"] = "5000"
-config["documentView"]["limitThumbnailsToResults"] = "true"
-config["documentView"]["prefetch"] = "true"
-config["documentView"]["prefetchDistance"] = "5"
-config["documentView"]["relativeJumps"] = "true"
-
-config["mainWindow"]["recentlyClosedCount"] = "20"
-config["mainWindow"]["recentlyUsedCount"] = "40"
-config["mainWindow"]["restorePerFileSettings"] = "true"
-config["mainWindow"]["restoreTabs"] = "true"
-config["mainWindow"]["searchableMenus"] = "true"
-config["mainWindow"]["tabVisibility"] = "0"
-config["mainWindow"]["trackRecentlyUsed"] = "true"
-config["mainWindow"]["viewToolBar"] = "scaleFactor, zoomIn, zoomOut, fitToPageWidthMode"
-
-config["pageItem"]["cacheSize"] = "131072K"
-
-with open(QPDFVIEW_CONFIG_CONFIG, "w") as file:
-    config.write(file, space_around_delimiters=False)
-
-# =======================================================================================
-
-QPDFVIEW_CONFIG_SHORTCUTS = QPDFVIEW_CONFIGDIR + "shortcuts.conf"
-
-if os.path.exists(QPDFVIEW_CONFIG_SHORTCUTS):
-    shutil.copyfile(QPDFVIEW_CONFIG_SHORTCUTS, QPDFVIEW_CONFIG_SHORTCUTS + ".orig")
-
-shortcut_config = configparser.RawConfigParser()
-shortcut_config.optionxform = lambda optionstr: optionstr
-shortcut_config.read(QPDFVIEW_CONFIG_SHORTCUTS)
-
-shortcut_config["General"]["continuousMode"] = "Ctrl+7, C"
-shortcut_config["General"]["findNext"] = "Ctrl+G, Return"
-shortcut_config["General"]["findPrevious"] = "Ctrl+Shift+G, Shift+Return"
-shortcut_config["General"]["jumpToPage"] = "Ctrl+J, G"
-shortcut_config["General"]["nextPage"] = "Space, N"
-shortcut_config["General"]["previousPage"] = "Backspace, P"
-
-with open(QPDFVIEW_CONFIG_SHORTCUTS, "w") as file:
-    shortcut_config.write(file, space_around_delimiters=False)

extra_configs/xremap_mouse_config.yml

@@ -1,15 +0,0 @@
-keymap:
-  - name: Wheel Tilt
-    remap:
-      # Side forward
-      # Btn_Side: Left
-      # Side back
-      # Btn_Extra: Right
-      XRIGHTSCROLL:
-        remap:
-          XHIRES_RIGHTSCROLL: Ctrl-Tab
-      XLEFTSCROLL:
-        remap:
-          XHIRES_LEFTSCROLL: Ctrl-Shift-Tab
-    device:
-      only: 'Logi M750 Mouse'

julia-sysimages

@@ -1 +1 @@
-Subproject commit 98581abe7cb2baecd63e95c337da08778fec60ae
+Subproject commit 21f32a2032614d2e923be436ca4a4f0f07a8cdc5

nix/README.md

@@ -1,14 +0,0 @@
-# Experimental Nix flake for general cli environment
-- Basically for servers, not for my laptops.
-
-# How to Install
-```sh
-$ nix flake build
-$ nix profile install .#my-packages
-```
-
-# How to upgrade
-```sh
-$ nix flake upgrade
-$ nix profile upgrade my-packages
-```

nix/flake.nix

@@ -1,25 +0,0 @@
-{
-  description = "A very basic flake";
-
-  inputs = {
-    nixpkgs.url = "github:nixos/nixpkgs?ref=nixos-unstable";
-  };
-
-  outputs = { self, nixpkgs }: {
-
-    packages.x86_64-linux.my-packages = nixpkgs.legacyPackages.x86_64-linux.buildEnv {
-      name = "my-packages-list";
-      paths = [
-        nixpkgs.legacyPackages.x86_64-linux.fish
-        nixpkgs.legacyPackages.x86_64-linux.git
-        nixpkgs.legacyPackages.x86_64-linux.curl
-        nixpkgs.legacyPackages.x86_64-linux.neovim
-        nixpkgs.legacyPackages.x86_64-linux.ripgrep
-        nixpkgs.legacyPackages.x86_64-linux.fzf
-
-        nixpkgs.legacyPackages.x86_64-linux.clang-tools
-      ];
-    };
-  };
-}
-